The state government of Madhya Pradesh had announced the college as autonomous in the year 1997, and the management of the Institute is regulated by the registered society (vide letter No 4245/97 dated 06-01-1997), named as Pt. Khushi Lal Sharma Government Ayurveda College & Institute society, Bhopal.
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General Council (Sadharan Sabha)
Top governing body (The "Sadharan Sabha") is presided over by the Hon'ble Minister of Ayush, Government of M.P. The Principal Secretary, AYUSH Department and the Director, Ayush, M.P. are the hon'ble Members of the Society. The Principal of the College has been designed as Member Secretary and the Chief Executive Officer of the Institute.
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Executive Committee ( Karyakarani Samiti)
The Executive Committee of the Institute is chaired by the Commissioner of Bhopal Division and the Director of Ayush Department acts as an Hon'ble Members of the Committee. The Principal of the college is member secretary to this committee.
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Academic Committee and Finance Committee
Besides above, College has also the Academic Committee and Finance Committee for implementation and regulation of academic and financial activities.